Genome-wide identification and characterization of R2R3MYB family in Rosaceae

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Genome-wide identification and characterization of R2R3MYB family in Rosaceae

Transcription factors R2R3MYB family have been associated with the control of secondary metabolites, development of structures, cold tolerance and response to biotic and abiotic stress, among others. In recent years, genomes of Rosaceae botanical family are available. Although this information has been used to study the karyotype evolution of these species from an ancestral genome, there are no...

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Genome-Wide Identification and Characterization of R2R3MYB Family in Cucumis sativus

BACKGROUND The R2R3MYB proteins comprise one of the largest families of transcription factors in plants. Although genome-wide analysis of this family has been carried out in some species, little is known about R2R3MYB genes in cucumber (Cucumis sativus L.). PRINCIPAL FINDINGS This study has identified 55 R2R3MYB genes in the latest cucumber genome and the CsR2R3MYB family contained the smalle...

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Bioinformatics Genome-Wide Characterization of the WRKY Gene Family in Sorghum bicolor

The WRKY gene family encodes a large group of transcription factors that regulate genes involved in plant response to biotic and abiotic stresses. Sorghum is a notable grain and forage crop in semi-arid regions because of its unusual tolerance against hot and dry environments. We identified a set of 85 WRKY genes in the S. bicolor genome and classified them into three groups (I–III). Among the ...

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Genome-wide identification and characterization of aquaporin gene family in Beta vulgaris

Aquaporins (AQPs) are essential channel proteins that execute multi-functions throughout plant growth and development, including water transport, uncharged solutes uptake, stress response, and so on. Here, we report the first genome-wide identification and characterization AQP (BvAQP) genes in sugar beet (Beta vulgaris), an important crop widely cultivated for feed, for sugar production and for...

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Genome-Wide Identification, Characterization and Expression Profiling of ADF Family Genes in Solanum lycopersicum L.

The actin depolymerizing factor (ADF) proteins have growth, development, defense-related and growth regulatory functions in plants. The present study used genome-wide analysis to investigate ADF family genes in tomato. Eleven tomato ADF genes were identified and differential expression patterns were found in different organs. SlADF6 was preferentially expressed in roots, suggesting its function...

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ژورنال

عنوان ژورنال: Genomics Data

سال: 2016

ISSN: 2213-5960

DOI: 10.1016/j.gdata.2016.06.004